Cellulolytic enzymes production guided by morphology engineering
Graphical abstract
Introduction
Submerged fermentations of filamentous microorganisms form the foundation of industrial production of fungal enzymes. These microorganisms display a complex morphological life, with forms being classified into pellets and dispersed mycelium. This includes clumps, branched and isolated hyphae [1]. Morphology has a big impact on accumulation of bio-based products [2,3].
Microbial morphology and growth forms are defined by broth rheology, oxygen transfer and shear conditions within a bioreactor, which in turn affect efficiency of enzyme production [4,5,6]. Impellers influence fungal morphology and growth due to shear conditions and oxygen transfer [7,8,9,10]. The environment and interactions during the cultivation of microorganisms are complex, and together with the specific physiology and secretion pathways for a given microorganism, make it difficult to quantify the influence of individual variables on the production efficiency [4,11].
Morphology engineering may be achieved by the use of microparticles [12,13], changes in the spore concentration [14], pH of the inoculum [15] and medium osmolality [16]. However, this poses challenges to defining protocols for selecting appropriate bioprocess conditions, or specific conditions for generation of bio-based products as a function of microorganism and/or the strain. Ahamed and Vermette [17], when cultivating Trichoderma reesei with disperse morphology, concluded that the highest number of hyphae tips by clumps resulted in enhanced production of cellulases. Callow and Ju [18], when cultivating T. reesei in pellet form by addition of surfactants showed an increase in 73% of cellulase production compared to cultivation in the absence of surfactants that caused more dispersed morphology. Dong et al. [19] were able to alter the morphology of Trichoderma viride, reducing the pellet size diameter by three times resulting in an increasing enzyme activity by 17%. Morphology was also found to be associated with higher expression levels of hemicellulase [20].
Reports in literature [21,22] have shown endoglucanase and xylanase are critical enzymes for liquefaction of high solids lignocellulosic biomass, which can facilitate movement of biomass within a biorefinery [23], hence favoring a more cost-effective process. Together with β-glucosidase, these enzymes are also important for the production of desired lignocellulosic biomass derived products [23]. Aspergillus niger is a filamentous fungus recognized as a good producer of both cellulolytic and hemicellulolytic enzymes and has been granted GRAS status from the FDA [24,25,26,27,28,29]. In previous work, Buffo et al. [8], working only with pellet morphology, analyzed the effect of different bioreactor conditions, such as agitation and aeration, in pellet fragmentation of Aspergillus niger and the effect on endoglucanase and β-glucosidase production. The authors verified a higher production of β-glucosidase coincided with an increased pellet fragmentation, while a lower extent of fragmentation favored endoglucanase production.
This paper aims to further understand the relation between fungal morphology for increased production of A. niger cellulolytic (endoglucanase and β-glucosidase) and hemicellulolytic (xylanase). More specifically, it is reported a statistical design of experiments in which spore concentrations and pH were varied, to obtain different morphologies for enzyme production. The impact of the combined effects has not been previously reported, to the best of our knowledge. The data presented here show the different combinations of pH and spore concentrations that were tested influence inoculum morphologies (pellets, clumps and branched/isolated hyphae), and this could be directed to selectively produce one type of enzyme over the other. A morphologic scale (Y) is proposed, based on a form factor that considers the size and frequency of each morphology class, and points to conditions that result in high selectivity for either endoglucanase or β-glucosidase production, with co-production of xylanase. An equation that relates enzyme yield as a function of A. niger morphology provides a useful tool for tuning enzyme production.
Section snippets
Microorganism
A wild-type strain of the filamentous fungi Aspergillus niger F-12 was obtained from the Embrapa Food Technology collection (Rio de Janeiro, Brazil), with National Register of Biological Collections under number BRM028885. This strain has been previously characterized as a good cellulolytic and hemicellulolytic enzyme producer [8,25].
The microorganism was maintained at −18 °C and reactivated at least every 90 days by incubation in slants of potato dextrose agar medium for 5 days at 32 °C.
Results and discussion
Microbial morphology may be used to tune the expression and secretion of enzymes of interest in the filamentous fungus A. niger. An example of potential use is in a biorefinery in the context of a low carbon footprint economy, with production of a commercial preparation tailored for use in the liquefaction of lignocellulosic biomass at high solids. This approach may enable higher production of endoglucanase and/or xylanase and lower production of beta-glucosidase and/or beta-xylosidase, thereby
Conclusion
The present work shows the potential use of morphological engineering to optimize the production of bio-based products, such as cellulolytic enzymes. In this work, it is shown the morphology of A. niger can be modulated in order to favor the production of specific cellulolytic enzymes. By using different combinations of pH and spore concentrations it was possible to obtain inoculum with varied morphologies, from pellets of different sizes to completely dispersed inoculum, which in turn favored
Author Statement
The roles of the authors are as follows: Mariane Buffo and André Ferreira, methodology, validation investigation, formal analysis, writing – original draft, review, and editing; Renata Almeida, Cristiane Farinas, Alberto Badino, Eduardo Ximenes, Michael Ladisch: conceptualization, methodology, writing – review and editing; Eduardo Ximenes, Cristiane Farinas, Alberto Badino, Michael Ladisch: Formal analysis, visualization, supervision, project administration; funding acquisition.
Declaration of Competing Interest
None.
Acknowledgements
The authors are grateful for the financial support provided by: Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES, Finance Code 001), Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) (grant numbers 310098-2017-3, 431460/2016-7, 208422/2017-0), and FAPESP (grant number 2016/10638-8, 2018/11405-5). This work was also supported by DOE Cooperative AgreementDE-EE0008256/0000.
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